STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT66807.1ATPase AAA, transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (718 aa)    
Predicted Functional Partners:
KRT65173.1
TPR domain protein.
  
 0.956
KRT65605.1
Putative aminopeptidase.
    
 0.921
KRT62316.1
Putative cell division protein.
  
 
 
0.870
KRT66610.1
Histone deacetylase family protein.
  
 
 0.869
KRT66884.1
Polymerase III subunit beta, DNA polymerase III subunit beta protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta [...]
    
 0.861
KRT65090.1
Histone deacetylase superfamily.
    
 0.851
KRT63230.1
ABC transporter.
   
 0.835
KRT63231.1
ABC transporter, ATP-binding cassette, subfamily B, bacterial.
   
 0.835
KRT66808.1
Type 4 prepilin-like protein leader peptide processing enzyme, leader peptidase (prepilin peptidase) / N-methyltransferase.
       0.746
KRT66847.1
NAD-dependent aldehyde dehydrogenase.
  
  
  0.736
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.