STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT66225.1LuxR family transcriptional regulator. (89 aa)    
Predicted Functional Partners:
KRT66132.1
Multi-sensor hybrid histidine kinase.
  
 0.997
KRT62672.1
PAS domain-containing protein.
  
 0.988
KRT67037.1
Periplasmic sensor signal transduction histidine kinase.
 
 0.969
KRT65281.1
ATPase ATP-binding domain-containing protein, two-component system, NtrC family, sensor kinase.
  
 0.877
KRT64984.1
Response regulator receiver/GGDEF/EAL domain-containing protein.
  
 0.869
KRT66130.1
Response regulator receiver.
  
 0.820
KRT65961.1
GAF sensor signal transduction histidine kinase.
   
 0.796
KRT66655.1
Mechanosensitive ion channel.
  
 0.723
KRT65173.1
TPR domain protein.
  
 
 0.722
KRT64880.1
Peptidase S1 and S6 chymotrypsin/Hap, superkiller protein 3.
  
 0.704
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.