STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT66139.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
KRT66138.1
Polysaccharide export protein.
       0.664
KRT66134.1
Transcription termination factor NusG domain protein.
       0.595
KRT66135.1
JEM1, KAR8, Jem1p, DnaJ-like protein subfamily C member 3.
       0.595
KRT66136.1
Hypothetical protein.
       0.595
KRT66137.1
Lipopolysaccharide biosynthesis protein.
       0.595
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.