STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT65559.1Putative NHL repeat containing protein. (708 aa)    
Predicted Functional Partners:
KRT64543.1
WD40 domain-containing protein, TolB protein.
   
 
 0.970
KRT65901.1
Biopolymer transport protein ExbD/TolR, biopolymer transport protein TolR.
  
 0.967
KRT65659.1
Biopolymer transport protein ExbD/TolR.
  
 0.967
KRT65900.1
Protein TolQ, biopolymer transport protein TolQ.
  
 0.960
KRT65660.1
MotA/TolQ/ExbB proton channel, biopolymer transport protein ExbB.
  
 0.960
KRT65546.1
Cytochrome-c peroxidase, cytochrome c peroxidase.
  
 
 0.942
KRT66707.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
   
  0.934
btuB
Cobalamin receptor protein, iron complex outermembrane recepter protein.
   
 0.918
KRT65260.1
Cytochrome c family protein.
  
 0.867
KRT66169.1
Cytochrome b/b6 domain-containing protein, ubiquinol-cytochrome c reductase cytochrome b subunit.
  
 0.845
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.