STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhAGlutamate dehydrogenase, glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (418 aa)    
Predicted Functional Partners:
KRT64999.1
Glutamate synthase family protein.
  
 0.999
KRT64998.1
Glutamate synthase NADH/NADPH small subunit, glutamate synthase (NADPH/NADH) small chain.
  
 0.899
KRT67096.1
Icd, isocitrate dehydrogenase, nADP-dependent, isocitrate dehydrogenase.
   
 0.892
KRT66707.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
    
 0.877
ilvE
Branched-chain amino acid aminotransferase, branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.856
KRT66460.1
Hypothetical protein.
    
 0.822
cobB
Silent information regulator protein Sir2, NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
    
 0.822
KRT65743.1
Transcription regulator, Sir2 family, NAD-dependent deacetylase.
    
 0.822
sir2
Family protein, NAD-dependent deacetylase.
    
 0.822
guaA
GMP synthase, large subunit, GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.821
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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