Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRT63075.1 | KRT64999.1 | XU11_C0069G0004 | XU11_C0039G0005 | Ssb-2, single-strand binding protein, single-strand DNA-binding protein. | Glutamate synthase family protein. | 0.521 |
| KRT63075.1 | polA | XU11_C0069G0004 | XU11_C0021G0014 | Ssb-2, single-strand binding protein, single-strand DNA-binding protein. | polA-1, DNA polymerase I, DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.701 |
| KRT63075.1 | rpoA | XU11_C0069G0004 | XU11_C0025G0053 | Ssb-2, single-strand binding protein, single-strand DNA-binding protein. | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.453 |
| KRT63075.1 | topA | XU11_C0069G0004 | XU11_C0029G0020 | Ssb-2, single-strand binding protein, single-strand DNA-binding protein. | Putative DNA protecting protein DprA/DNA topoisomerase I, DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes [...] | 0.960 |
| KRT63139.1 | polA | XU11_C0068G0003 | XU11_C0021G0014 | Hypothetical protein. | polA-1, DNA polymerase I, DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.977 |
| KRT63139.1 | recA | XU11_C0068G0003 | XU11_C0004G0028 | Hypothetical protein. | Protein, recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.875 |
| KRT63139.1 | rpoA | XU11_C0068G0003 | XU11_C0025G0053 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.438 |
| KRT63139.1 | topA | XU11_C0068G0003 | XU11_C0029G0020 | Hypothetical protein. | Putative DNA protecting protein DprA/DNA topoisomerase I, DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes [...] | 0.906 |
| KRT64852.1 | polA | XU11_C0046G0007 | XU11_C0021G0014 | SMC domain-containing protein, exonuclease SbcC. | polA-1, DNA polymerase I, DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.977 |
| KRT64852.1 | recA | XU11_C0046G0007 | XU11_C0004G0028 | SMC domain-containing protein, exonuclease SbcC. | Protein, recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.875 |
| KRT64852.1 | topA | XU11_C0046G0007 | XU11_C0029G0020 | SMC domain-containing protein, exonuclease SbcC. | Putative DNA protecting protein DprA/DNA topoisomerase I, DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes [...] | 0.906 |
| KRT64867.1 | KRT64999.1 | XU11_C0045G0005 | XU11_C0039G0005 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | Glutamate synthase family protein. | 0.893 |
| KRT64867.1 | KRT66707.1 | XU11_C0045G0005 | XU11_C0005G0035 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.999 |
| KRT64867.1 | leuS | XU11_C0045G0005 | XU11_C0003G0059 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | leucyl-tRNA synthetase, leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.629 |
| KRT64867.1 | topA | XU11_C0045G0005 | XU11_C0029G0020 | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | Putative DNA protecting protein DprA/DNA topoisomerase I, DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes [...] | 0.966 |
| KRT64999.1 | KRT63075.1 | XU11_C0039G0005 | XU11_C0069G0004 | Glutamate synthase family protein. | Ssb-2, single-strand binding protein, single-strand DNA-binding protein. | 0.521 |
| KRT64999.1 | KRT64867.1 | XU11_C0039G0005 | XU11_C0045G0005 | Glutamate synthase family protein. | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit. | 0.893 |
| KRT64999.1 | KRT66707.1 | XU11_C0039G0005 | XU11_C0005G0035 | Glutamate synthase family protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. | 0.919 |
| KRT64999.1 | polA | XU11_C0039G0005 | XU11_C0021G0014 | Glutamate synthase family protein. | polA-1, DNA polymerase I, DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.538 |
| KRT64999.1 | recA | XU11_C0039G0005 | XU11_C0004G0028 | Glutamate synthase family protein. | Protein, recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.522 |
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