STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT65280.1Sigma-54-dependent transcriptional response regulator. (476 aa)    
Predicted Functional Partners:
KRT65281.1
ATPase ATP-binding domain-containing protein, two-component system, NtrC family, sensor kinase.
 
 0.969
KRT66132.1
Multi-sensor hybrid histidine kinase.
  
 0.938
KRT66861.1
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
 0.923
KRT62672.1
PAS domain-containing protein.
 
 0.866
KRT66718.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.853
KRT65277.1
RNA polymerase sigma 54 subunit RpoN, RNA polymerase sigma-54 factor.
 
  
 0.850
KRT64984.1
Response regulator receiver/GGDEF/EAL domain-containing protein.
  
 
0.795
KRT65301.1
Nitrogen-specific signal transduction histidine kinase NtrB, two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 
 0.782
KRT66130.1
Response regulator receiver.
 
 
 0.767
KRT64880.1
Peptidase S1 and S6 chymotrypsin/Hap, superkiller protein 3.
  
 0.729
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.