Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRT62672.1 | KRT64911.1 | XU11_C0078G0003 | XU11_C0043G0016 | PAS domain-containing protein. | Two-component sensor histidine kinase. | 0.993 |
KRT62672.1 | KRT65050.1 | XU11_C0078G0003 | XU11_C0037G0004 | PAS domain-containing protein. | CoA-disulfide reductase. | 0.834 |
KRT62672.1 | KRT65141.1 | XU11_C0078G0003 | XU11_C0034G0004 | PAS domain-containing protein. | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type, pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.435 |
KRT62672.1 | KRT65143.1 | XU11_C0078G0003 | XU11_C0034G0006 | PAS domain-containing protein. | Branched-chain alpha-keto acid dehydrogenase subunit E2, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). | 0.972 |
KRT62672.1 | KRT65144.1 | XU11_C0078G0003 | XU11_C0034G0007 | PAS domain-containing protein. | Dihydrolipoamide dehydrogenase, dihydrolipoamide dehydrogenase. | 0.834 |
KRT62672.1 | KRT65441.1 | XU11_C0078G0003 | XU11_C0026G0003 | PAS domain-containing protein. | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component, mercuric reductase. | 0.834 |
KRT62672.1 | KRT65949.1 | XU11_C0078G0003 | XU11_C0016G0018 | PAS domain-containing protein. | Cyclic nucleotide-binding protein. | 0.946 |
KRT62672.1 | KRT66132.1 | XU11_C0078G0003 | XU11_C0013G0031 | PAS domain-containing protein. | Multi-sensor hybrid histidine kinase. | 0.999 |
KRT62672.1 | prs | XU11_C0078G0003 | XU11_C0040G0015 | PAS domain-containing protein. | Ribose-phosphate pyrophosphokinase, ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.895 |
KRT64911.1 | KRT62672.1 | XU11_C0043G0016 | XU11_C0078G0003 | Two-component sensor histidine kinase. | PAS domain-containing protein. | 0.993 |
KRT64911.1 | KRT65050.1 | XU11_C0043G0016 | XU11_C0037G0004 | Two-component sensor histidine kinase. | CoA-disulfide reductase. | 0.774 |
KRT64911.1 | KRT65143.1 | XU11_C0043G0016 | XU11_C0034G0006 | Two-component sensor histidine kinase. | Branched-chain alpha-keto acid dehydrogenase subunit E2, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase). | 0.965 |
KRT64911.1 | KRT65144.1 | XU11_C0043G0016 | XU11_C0034G0007 | Two-component sensor histidine kinase. | Dihydrolipoamide dehydrogenase, dihydrolipoamide dehydrogenase. | 0.774 |
KRT64911.1 | KRT65441.1 | XU11_C0043G0016 | XU11_C0026G0003 | Two-component sensor histidine kinase. | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component, mercuric reductase. | 0.774 |
KRT64911.1 | KRT65949.1 | XU11_C0043G0016 | XU11_C0016G0018 | Two-component sensor histidine kinase. | Cyclic nucleotide-binding protein. | 0.724 |
KRT64911.1 | KRT66132.1 | XU11_C0043G0016 | XU11_C0013G0031 | Two-component sensor histidine kinase. | Multi-sensor hybrid histidine kinase. | 0.997 |
KRT64911.1 | prs | XU11_C0043G0016 | XU11_C0040G0015 | Two-component sensor histidine kinase. | Ribose-phosphate pyrophosphokinase, ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.877 |
KRT65050.1 | KRT62672.1 | XU11_C0037G0004 | XU11_C0078G0003 | CoA-disulfide reductase. | PAS domain-containing protein. | 0.834 |
KRT65050.1 | KRT64911.1 | XU11_C0037G0004 | XU11_C0043G0016 | CoA-disulfide reductase. | Two-component sensor histidine kinase. | 0.774 |
KRT65050.1 | KRT65141.1 | XU11_C0037G0004 | XU11_C0034G0004 | CoA-disulfide reductase. | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type, pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.748 |
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