STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT62620.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
nuoB
NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
 
 0.991
KRT65701.1
AMP-dependent synthetase and ligase, long-chain acyl-CoA synthetase.
  
 0.984
nuoF
NADH-quinone oxidoreductase subunit F, NADH dehydrogenase I, chain F, NDH-1, chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.952
nuoE
NADH dehydrogenase (ubiquinone), NADH-quinone oxidoreductase subunit E.
   
   0.947
KRT65193.1
Molybdopterin oxidoreductase Fe4S4 region.
   
 
 0.944
KRT66294.1
NAD-dependent epimerase/dehydratase, NADH dehydrogenase, NADH dehydrogenase.
  
   0.923
acpP
Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.826
KRT65972.1
Acyl carrier protein.
   
  0.826
KRT67135.1
NADH dehydrogenase subunit I.
   
   0.799
nuoI
NADH-quinone oxidoreductase subunit I, NADH dehydrogenase I subunit I, NDH-1 subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
   0.799
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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