Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRT62416.1 | KRT62417.1 | XU11_C0084G0001 | XU11_C0084G0002 | Def, peptide deformylase, peptide deformylase. | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | 0.554 |
| KRT62416.1 | KRT62418.1 | XU11_C0084G0001 | XU11_C0084G0003 | Def, peptide deformylase, peptide deformylase. | Hypothetical protein. | 0.453 |
| KRT62416.1 | rplS | XU11_C0084G0001 | XU11_C0017G0033 | Def, peptide deformylase, peptide deformylase. | 50S ribosomal protein L19, large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.932 |
| KRT62416.1 | rpsO | XU11_C0084G0001 | XU11_C0001G0057 | Def, peptide deformylase, peptide deformylase. | 30S ribosomal protein S15, small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.935 |
| KRT62417.1 | KRT62416.1 | XU11_C0084G0002 | XU11_C0084G0001 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | Def, peptide deformylase, peptide deformylase. | 0.554 |
| KRT62417.1 | KRT62418.1 | XU11_C0084G0002 | XU11_C0084G0003 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | Hypothetical protein. | 0.525 |
| KRT62417.1 | KRT62419.1 | XU11_C0084G0002 | XU11_C0084G0004 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | Putative insertion element transposase. | 0.421 |
| KRT62417.1 | KRT65487.1 | XU11_C0084G0002 | XU11_C0025G0005 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | (p)ppGpp synthetase I SpoT/RelA, GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.632 |
| KRT62417.1 | hisC | XU11_C0084G0002 | XU11_C0003G0048 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | Histidinol-phosphate aminotransferase, histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.460 |
| KRT62417.1 | hisC1 | XU11_C0084G0002 | XU11_C0027G0029 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | Histidinol-phosphate aminotransferase, histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.460 |
| KRT62417.1 | hupB | XU11_C0084G0002 | XU11_C0021G0038 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | Transcriptional dual regulator HU-beta, DNA-binding protein HU-beta; Belongs to the bacterial histone-like protein family. | 0.433 |
| KRT62417.1 | polA | XU11_C0084G0002 | XU11_C0021G0014 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | polA-1, DNA polymerase I, DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.516 |
| KRT62417.1 | rplS | XU11_C0084G0002 | XU11_C0017G0033 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | 50S ribosomal protein L19, large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.412 |
| KRT62417.1 | rpsO | XU11_C0084G0002 | XU11_C0001G0057 | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | 30S ribosomal protein S15, small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.427 |
| KRT62418.1 | KRT62416.1 | XU11_C0084G0003 | XU11_C0084G0001 | Hypothetical protein. | Def, peptide deformylase, peptide deformylase. | 0.453 |
| KRT62418.1 | KRT62417.1 | XU11_C0084G0003 | XU11_C0084G0002 | Hypothetical protein. | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | 0.525 |
| KRT62418.1 | KRT62419.1 | XU11_C0084G0003 | XU11_C0084G0004 | Hypothetical protein. | Putative insertion element transposase. | 0.603 |
| KRT62419.1 | KRT62417.1 | XU11_C0084G0004 | XU11_C0084G0002 | Putative insertion element transposase. | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | 0.421 |
| KRT62419.1 | KRT62418.1 | XU11_C0084G0004 | XU11_C0084G0003 | Putative insertion element transposase. | Hypothetical protein. | 0.603 |
| KRT65487.1 | KRT62417.1 | XU11_C0025G0005 | XU11_C0084G0002 | (p)ppGpp synthetase I SpoT/RelA, GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Histone family protein DNA-binding protein, integration host factor subunit beta; Belongs to the bacterial histone-like protein family. | 0.632 |
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