STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gudPMajor facilitator superfamily protein. (401 aa)    
Predicted Functional Partners:
KRT75442.1
Secretion protein HlyD, HlyD family secretion protein.
 
   
 0.716
KRT75441.1
ABC transporter ATP-binding protein.
 
     0.698
KRT75443.1
Zn-dependent protease; Belongs to the peptidase M16 family.
       0.620
KRT70830.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
   
 0.588
KRT75440.1
ABC transporter permease.
 
     0.566
KRT75445.1
Serine protease Do.
       0.557
KRT75446.1
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.557
KRT75447.1
Inner-membrane translocator, branched-chain amino acid transport system permease protein.
       0.557
KRT71402.1
EmrB/QacA family drug resistance transporter, MFS transporter, DHA2 family, multidrug resistance protein B; Belongs to the major facilitator superfamily.
  
  
 0.506
KRT73116.1
Multicopper oxidase type 3.
  
  
  0.504
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.