STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT74768.1Carboxymethylenebutenolidase, carboxymethylenebutenolidase. (226 aa)    
Predicted Functional Partners:
KRT74767.1
Glycosyl hydrolase, glucoamylase.
       0.773
KRT74769.1
Hypothetical protein.
       0.773
KRT74770.1
CBS domain-containing protein.
       0.773
thiL
Thiamine-monophosphate kinase, thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.773
KRT68098.1
Lactaldehyde reductase.
  
 
 0.662
KRT75378.1
Intradiol ring-cleavage dioxygenase.
   
 
 0.594
KRT74766.1
Hypothetical protein.
       0.566
KRT71657.1
Betaine-aldehyde dehydrogenase.
   
 
  0.566
KRT68126.1
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 
  0.566
KRT74145.1
FadB, 3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxybutyryl-CoA dehydrogenase.
   
 
  0.548
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.