STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT74161.1Hypothetical protein. (465 aa)    
Predicted Functional Partners:
KRT67898.1
ATPase.
 
   
 0.786
KRT74162.1
Hypothetical protein.
       0.773
KRT74163.1
Transcriptional regulator, IclR family.
       0.773
KRT74160.1
TRAP transporter solute receptor, TAXI family.
       0.642
KRT67163.1
F420-dependent oxidoreductase, luciferase-like protein.
  
     0.570
KRT74164.1
Hypothetical protein.
       0.522
KRT65925.1
Luciferase family protein.
  
     0.518
KRT74155.1
Hypothetical protein.
 
     0.514
KRT74165.1
AMP-dependent synthetase and ligase, long-chain acyl-CoA synthetase.
       0.512
KRT74157.1
Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.449
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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