STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT72916.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
KRT68144.1
Hypothetical protein.
     0.880
KRT72917.1
Zinc-containing alcohol dehydrogenase.
       0.601
KRT72918.1
CoA-transferase family iii; Belongs to the CoA-transferase III family.
       0.601
KRT72919.1
Hypothetical protein.
       0.588
KRT72920.1
D-proline reductase, D-proline reductase (dithiol) PrdB.
       0.529
KRT72921.1
Short-chain dehydrogenase/reductase SDR.
       0.489
KRT72922.1
AMP-dependent synthetase and ligase, long-chain acyl-CoA synthetase.
       0.489
KRT72923.1
AMP-dependent synthetase/ligase.
       0.486
KRT68362.1
Putative anti-sigma factor.
 
     0.464
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.