STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT72929.1poly(R)-hydroxyalkanoic acid synthase subunit PhaC. (365 aa)    
Predicted Functional Partners:
KRT72925.1
Transcriptional regulator.
 
   
 0.828
KRT72927.1
Phosphate acetyltransferase.
 
  
 0.812
baiF
baiF-2, bile acid-inducible operon protein F; Belongs to the CoA-transferase III family.
       0.773
KRT72931.1
Putative acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
       0.773
KRT71470.1
3-hydroxy-2-methylbutyryl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.668
KRT71819.1
Alpha/beta hydrolase fold protein.
  
  
 0.654
KRT71655.1
Alpha/beta hydrolase, haloalkane dehalogenase.
  
  
 0.637
KRT69925.1
Alpha/beta hydrolase family protein.
  
  
 0.635
KRT75329.1
NAD-dependent epimerase/dehydratase, dTDP-glucose 4,6-dehydratase.
     
 0.620
galE
UDP-glucose 4-epimerase, UDP-glucose 4-epimerase.
     
 0.620
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.