STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT72386.1enoyl-CoA hydratase. (261 aa)    
Predicted Functional Partners:
KRT73032.1
Multi-sensor signal transduction histidine kinase.
   
 0.978
KRT71612.1
Histidine kinase.
   
 0.978
KRT66148.1
Histidine kinase, two-component system, NtrC family, sensor kinase.
    
 0.971
KRT73025.1
3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.933
KRT74145.1
FadB, 3-hydroxybutyryl-CoA dehydrogenase, 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.930
KRT72144.1
Acetyl-CoA acetyltransferase-like protein, acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.896
KRT72145.1
Hypothetical protein.
  
 0.896
KRT72384.1
Two component sigma-54 specific Fis family transcriptional regulator.
   
 0.895
rpsI
30S ribosomal protein S9, small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.825
rpsP
30S ribosomal protein S16, small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.824
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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