STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT72395.1Trypsin domain/PDZ domain-containing protein. (478 aa)    
Predicted Functional Partners:
KRT69766.1
Hypothetical protein; Belongs to the AAA ATPase family.
   
 0.958
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.861
tilS
tRNA(Ile)-lysidine synthetase, tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
  
    0.785
KRT72393.1
Molybdopterin converting factor subunit 1, molybdopterin synthase catalytic subunit.
  
    0.783
KRT68069.1
Periplasmic serine proteinase.
  
     0.772
KRT72396.1
AtoC, response regulator, two-component system, NtrC family, response regulator AtoC.
       0.737
iscA-2
Iron-binding protein IscA (iron-sulfur cluster assembly protein); Belongs to the HesB/IscA family.
     
 0.731
KRT72397.1
Signal-transduction protein with CBS domain.
     
 0.687
KRT72398.1
Phosphonate ABC transporter substrate-binding protein, phosphonate transport system substrate-binding protein.
       0.685
KRT70617.1
Hypothetical protein.
   
 0.678
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.