STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT71364.1Siroheme synthase, precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. (209 aa)    
Predicted Functional Partners:
KRT71363.1
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 0.999
KRT65075.1
Class III aminotransferase, glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.920
hemL
Glutamate-1-semialdehyde 2,1-aminomutase (GSA), Glutamate-1-semialdehyde aminotransferase, GSA-AT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.851
KRT71370.1
Nitrate reductase gamma subunit.
  
    0.834
hemE
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
 
 0.803
KRT71368.1
Cytochrome c family protein.
       0.798
KRT71369.1
4Fe-4S ferredoxin.
     
 0.798
KRT71372.1
Sulfur relay protein, TusE/DsrC/DsvC family.
       0.788
KRT71365.1
Transcriptional regulator.
     
 0.785
KRT71371.1
Hypothetical protein.
       0.785
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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