STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT69185.1Putative exported solute binding protein. (402 aa)    
Predicted Functional Partners:
KRT69183.1
DctM family transporter.
 
 
 0.978
KRT69184.1
Hypothetical protein.
 
 
 0.958
KRT73833.1
TRAP dicarboxylate transporter subunit DctM.
 
 
 0.920
dctQ
Putative transporter related transmembrane protein.
 
 
 0.916
fcbT3
Large permease.
 
 
 0.848
KRT72451.1
Trap dicarboxylate transporter, dctm subunit.
  
  
 0.807
KRT72450.1
Tripartite ATP-independent periplasmic transporter DctQ component.
 
  
 0.783
KRT72449.1
Hypothetical protein.
  
 
0.684
dctP
Periplasmic protein.
  
 
0.673
KRT70844.1
TRAP dicarboxylate transporter subunit DctP.
   
 
 0.641
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.