STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT68495.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
KRT70420.1
Surface antigen (D15).
 
 
 0.982
KRT68494.1
Threonine aldolase, threonine aldolase.
  
    0.779
KRT68493.1
Oligopeptide ABC transporter ATP-binding protein, peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.774
tolR
Protein TolR, biopolymer transport protein TolR.
 
  
 0.712
KRT75334.1
Signal peptidase I, signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.703
KRT71775.1
WD40 domain-containing protein, TolB protein.
 
   
 0.678
tolQ
Protein, biopolymer transport protein TolQ.
 
   
 0.666
lolC
Lipoprotein releasing system, transmembrane protein, LolC/E family.
 
   
 0.662
KRT71335.1
Organic solvent tolerance protein, LPS-assembly protein.
 
  
 0.649
lnt
Lnt, Apolipoprotein N-acyltransferase (ALP N-acyltransferase); Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
   
 0.643
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.