STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT67016.1Hypothetical protein. (361 aa)    
Predicted Functional Partners:
KRT68013.1
GGDEF domain protein.
 
 0.905
KRT68071.1
Diguanylate cyclase.
 
 0.902
KRT67209.1
Response regulator receiver modulated diguanylate cyclase.
 
  
 0.894
KRT72208.1
Diguanylate cyclase.
 
 0.871
KRT72209.1
Diguanylate cyclase.
 
 0.865
KRT73245.1
Diguanylate cyclase.
 
 0.855
KRT71908.1
Response regulator.
 
  
 0.852
KRT66104.1
Histidine kinase.
   
 0.794
KRT67017.1
Hypothetical protein.
       0.773
KRT67018.1
Exopolysaccharide biosynthesis protein.
       0.766
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.