STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT66920.1ABC transporter, antibiotic transport system permease protein. (255 aa)    
Predicted Functional Partners:
KRT66921.1
Polyamine-transporting ATPase, antibiotic transport system ATP-binding protein.
    
 0.875
KRT66919.1
XRE family transcriptional regulator.
  
  
 0.792
KRT66917.1
Hypothetical protein.
       0.773
KRT66918.1
Hypothetical protein.
       0.773
KRT75440.1
ABC transporter permease.
  
 
  0.560
KRT66922.1
Hypothetical protein.
       0.558
KRT75441.1
ABC transporter ATP-binding protein.
    
 0.485
KRT75510.1
Hypothetical protein.
    
 0.485
KRT71788.1
ABC transporter.
    
 0.485
KRT68115.1
ABC transporter, ABC-2 type transport system ATP-binding protein.
    
 0.485
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.