STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT65980.1methylmalonyl-CoA mutase family protein. (545 aa)    
Predicted Functional Partners:
KRT73045.1
Hypothetical protein.
 0.998
KRT72156.1
Hypothetical protein.
 0.998
KRT65621.1
Hypothetical protein.
 0.998
KRT68229.1
Lysine/arginine/ornithine transport system kinase, LAO/AO transport system kinase.
 
 0.990
glmS
Methylaspartate mutase S subunit, methylaspartate mutase; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
  
 0.947
KRT72466.1
methylmalonyl-CoA epimerase, methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
  
 0.872
KRT65981.1
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.831
KRT65982.1
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
    
  0.829
KRT71705.1
methylmalonyl-CoA epimerase, methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
 
  
 0.823
KRT65983.1
Putative TIM-barrel fold metal-dependent hydrolase.
       0.723
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.