STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT65434.1Copper resistance D. (144 aa)    
Predicted Functional Partners:
KRT65435.1
Transcriptional regulator, Crp/Fnr family.
       0.773
KRT65433.1
Hypothetical protein.
 
     0.685
KRT65431.1
Hypothetical protein.
       0.557
KRT65432.1
Hypothetical protein.
       0.554
KRT65436.1
Hypothetical protein.
       0.551
KRT69176.1
Hypothetical protein.
  
     0.537
KRT71943.1
Hypothetical protein.
 
     0.499
KRT71944.1
Hypothetical protein.
 
     0.442
KRT67332.1
Hypothetical protein.
  
     0.437
KRT72094.1
Cytochrome c, class IC.
  
     0.405
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.