STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT64991.1General secretion pathway protein D, general secretion pathway protein D. (124 aa)    
Predicted Functional Partners:
gspG
Pseudopilin, cryptic, general secretion pathway.
 
  
 0.823
KRT64874.1
Hypothetical protein.
 
   
 0.812
KRT70617.1
Hypothetical protein.
  
 
 0.767
KRT74350.1
Hypothetical protein.
 
  
 0.734
KRT64994.1
Fimbrial assembly family protein, general secretion pathway protein L.
  
  
 0.671
KRT65674.1
Sporulation-like protein repeat-containing protein.
 
  
  0.516
gspF
General secretory pathway component, cryptic.
 
  
 0.511
KRT71392.1
TPR domain-containing protein.
 
  
  0.510
gspJ2
Protein GspJ2, general secretion pathway protein J.
 
  
 0.502
KRT68363.1
Hypothetical protein.
  
 
 0.500
Your Current Organism:
Rokubacteria bacterium CSP16
NCBI taxonomy Id: 1640509
Other names: C. Rokubacteria bacterium CSP1-6, Candidatus Rokubacteria bacterium CSP1-6, bacterium CSP1-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.