STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT64555.1Alanine racemase domain-containing protein. (434 aa)    
Predicted Functional Partners:
KRT63033.1
N-acyl-D-amino-acid deacylase, N-acyl-D-amino-acid deacylase.
 
   
 0.797
KRT62374.1
Hypothetical protein.
  
 
  0.705
KRT63669.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
  0.696
KRT64556.1
NUDIX hydrolase, 7,8-dihydro-8-oxoguanine triphosphatase; Belongs to the Nudix hydrolase family.
 
     0.553
KRT63155.1
Haloacid dehalogenase domain protein hydrolase.
   
 
  0.545
KRT63565.1
Thiamine pyrophosphate protein, acetolactate synthase I/II/III large subunit; Belongs to the TPP enzyme family.
  
 
  0.520
KRT62811.1
Acetolactate synthase large subunit, acetolactate synthase I/II/III large subunit.
  
 
  0.520
KRT64557.1
NADPH:quinone reductase and related Zn-dependent oxidoreductase.
  
    0.482
KRT64558.1
Alcohol dehydrogenase.
  
    0.482
KRT61785.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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