STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT64698.1Hypothetical protein. (326 aa)    
Predicted Functional Partners:
prmC
protein-(glutamine-N5) methyltransferase, release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
     0.977
prfA
Peptide chain release factor 1, peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
    0.807
KRT64701.1
Cof family hydrolase.
       0.732
rpmE
50S ribosomal protein L31, large subunit ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
       0.598
rpmA
50S ribosomal protein L27, large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.579
rplU
50S ribosomal protein L21, large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.578
hutG
Formiminoglutamase (Formiminoglutamate hydrolase), formiminoglutamase; Belongs to the arginase family.
   
    0.540
KRT63689.1
Arginase/agmatinase/formiminoglutamase, agmatinase; Belongs to the arginase family.
   
    0.540
KRT63269.1
Arginase, arginase; Belongs to the arginase family.
   
    0.540
KRT62562.1
Agmatinase, agmatinase; Belongs to the arginase family.
   
    0.540
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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