STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT63694.1Isochorismatase hydrolase. (234 aa)    
Predicted Functional Partners:
KRT63693.1
Xanthine/uracil/vitamin C permease, putative MFS transporter, AGZA family, xanthine/uracil permease.
 
  
  0.934
gatA
aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
   
  0.923
KRT63692.1
AIG2 family protein.
 
  
  0.846
KRT64112.1
Quinolinate phosphoribosyl transferase, nicotinate phosphoribosyltransferase.
  
 
 0.767
KRT63695.1
Carbamate kinase, carbamate kinase; Belongs to the carbamate kinase family.
       0.727
KRT62312.1
Putative oxidoreductase.
  
 0.721
nadD
Nicotinic acid mononucleotide adenylyltransferase, nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
    
 0.718
KRT63696.1
Hypothetical protein.
       0.712
KRT63697.1
Hypothetical protein.
       0.712
KRT64669.1
FAD dependent oxidoreductase; Belongs to the GcvT family.
   
 
  0.694
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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