STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT63092.1Extracellular solute-binding protein, putative spermidine/putrescine transport system substrate-binding protein. (376 aa)    
Predicted Functional Partners:
KRT63094.1
Putative ABC transporter permease, putative spermidine/putrescine transport system permease protein.
 
 
  0.959
KRT63093.1
Binding-protein-dependent transporter inner membrane component, putative spermidine/putrescine transport system permease protein.
 
 
  0.928
potA-5
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.842
KRT62655.1
Putative spermidine/putrescine transport system permease protein.
  
 
  0.617
KRT62656.1
ABC transporter permease protein, putative spermidine/putrescine transport system permease protein.
  
 
  0.617
KRT64253.1
ABC transporter, putrescine transport system permease protein, spermidine/putrescine transport system permease protein.
  
 
  0.616
KRT64287.1
Binding-protein-dependent transport system inner membrane protein, putative spermidine/putrescine transport system permease protein.
  
 
  0.614
KRT63379.1
Hypothetical protein.
  
     0.568
KRT64254.1
Binding-protein-dependent transport system inner membrane protein, putrescine transport system permease protein.
   
 
  0.555
KRT64182.1
Binding-protein-dependent transporter inner membrane component, spermidine/putrescine transport system permease protein.
   
 
  0.555
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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