STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT63060.1Putative oxidoreductase. (255 aa)    
Predicted Functional Partners:
KRT64624.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase, formate dehydrogenase, alpha subunit.
   
 0.886
KRT63468.1
AMP-binding enzyme/acyltransferase, long-chain acyl-CoA synthetase.
  
 0.869
KRT62905.1
NADPH-dependent glutamate synthase beta chain-like protein oxidoreductase.
    
 0.828
KRT64197.1
AMP-dependent synthetase and ligase:phospholipid/glycerol acyltransferase, long-chain acyl-CoA synthetase.
  
 0.802
KRT63062.1
Multi-sensor hybrid histidine kinase.
  
 0.783
KRT63063.1
Multi-sensor hybrid histidine kinase.
  
 0.783
KRT63535.1
Glutamate synthase, glutamate synthase (ferredoxin).
     
 0.780
KRT64044.1
Transaldolase, transaldolase / glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.731
KRT63059.1
Threonine dehydratase.
  
    0.707
KRT63058.1
Hypothetical protein.
       0.705
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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