STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT62632.1Daunorubicin resistance ABC transporter ATPase subunit, antibiotic transport system ATP-binding protein. (303 aa)    
Predicted Functional Partners:
pdr1
Pleiotropic drug resistance protein 1, antibiotic transport system permease protein.
 
  0.968
KRT62842.1
ABC transporter-like protein, branched-chain amino acid transport system ATP-binding protein.
 
   
 
0.896
KRT62266.1
ABC transporter, antibiotic transport system permease protein.
  
 
  0.805
KRT63407.1
Hypothetical protein.
   
  0.739
KRT62792.1
ABC transporter.
   
  0.739
KRT60888.1
Hypothetical protein.
  
 
  0.722
livF
High-affinity branched-chain amino acid ABC transporter ATP-binding protein, branched-chain amino acid transport system ATP-binding protein.
 
  
 
0.718
KRT60889.1
ABC-2 type transporter family protein.
  
 
  0.688
KRT60329.1
ABC transporter-like protein.
 
  
0.598
atpG
ATP synthase F1 subunit gamma, F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.586
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.