STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT62452.1Stage II sporulation D domain-containing protein. (554 aa)    
Predicted Functional Partners:
KRT62709.1
Uncharacterized protein.
  
 
 0.826
KRT64044.1
Transaldolase, transaldolase / glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.752
KRT64688.1
Penicillin-binding protein 2, penicillin-binding protein 2.
    
 0.679
KRT64207.1
Peptidoglycan glycosyltransferase, peptidoglycan glycosyltransferase.
    
 0.679
KRT63611.1
Peptidoglycan glycosyltransferase, cell division protein FtsI (penicillin-binding protein 3).
    
 0.679
KRT61785.1
Hypothetical protein.
  
     0.555
KRT64486.1
Peptidoglycan-binding protein LysM.
  
 
 0.543
KRT62481.1
Hypothetical protein.
  
 
 0.543
KRT64003.1
Alkaline phosphatase.
 
  
 0.532
KRT62451.1
Rieske (2Fe-2S) domain-containing protein, dioxygenase ferredoxin subunit.
       0.531
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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