STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT62307.1Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (409 aa)    
Predicted Functional Partners:
KRT63501.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.991
KRT60370.1
3-hydroxyacyl-CoA dehydrogenase, 3-hydroxybutyryl-CoA dehydrogenase.
 0.983
KRT62310.1
Short chain enoyl-CoA hydratase, enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.965
KRT64073.1
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.942
KRT64518.1
enoyl-CoA hydratase/isomerase, methylglutaconyl-CoA hydratase.
  
 0.939
KRT63528.1
acyl-CoA dehydrogenase.
  
 0.831
KRT63929.1
acyl-CoA dehydrogenase.
  
 0.796
bcd2
butyryl-CoA dehydrogenase.
  
 0.796
KRT63417.1
acyl-CoA dehydrogenase.
  
 0.796
KRT62306.1
Hypothetical protein.
       0.773
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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