STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT62219.1Hypothetical protein. (506 aa)    
Predicted Functional Partners:
KRT62223.1
Histidine kinase.
       0.788
KRT62218.1
Hypothetical protein.
       0.773
KRT62220.1
Hypothetical protein.
       0.773
KRT62221.1
DegS sensor signal transduction histidine kinase, two-component system, NarL family, sensor histidine kinase DegS.
       0.773
KRT62222.1
Two component transcriptional regulator, LuxR family.
       0.773
KRT63106.1
2-alkenal reductase, 2-alkenal reductase.
  
 
  0.575
KRT63190.1
Hypothetical protein.
  
 0.572
ndk
Ndk, nucleoside diphosphate kinase, nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.569
KRT62231.1
Type II secretion system protein F domain, tight adherence protein B.
 
     0.536
KRT62217.1
Hypothetical protein.
       0.527
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.