STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT62230.1Type II secretion system protein E, pilus assembly protein CpaF. (466 aa)    
Predicted Functional Partners:
KRT62231.1
Type II secretion system protein F domain, tight adherence protein B.
 
  
 0.975
KRT62232.1
Type II secretion system protein, tight adherence protein C.
 
  
 0.974
KRT62229.1
Response regulator receiver protein, pilus assembly protein CpaE.
  
 0.941
KRT62233.1
Hypothetical protein.
 
     0.920
KRT62228.1
Flp pilus assembly CpaB, pilus assembly protein CpaB.
 
  
 0.866
KRT62407.1
Response regulator receiver protein, pilus assembly protein CpaE.
  
 0.855
KRT63745.1
Response regulator receiver protein, pilus assembly protein CpaE.
  
 0.842
KRT62214.1
TadE family protein.
  
     0.708
KRT62760.1
Response regulator receiver, pilus assembly protein CpaE.
 
  
 0.622
KRT62213.1
Hypothetical protein.
  
     0.620
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.