STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT61789.1Class III aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (339 aa)    
Predicted Functional Partners:
KRT64554.1
aromatic-L-amino-acid decarboxylase.
 
   
  0.792
KRT61788.1
Dienelactone hydrolase-like protein enzyme.
       0.773
KRT60528.1
2-amino-3-ketobutyrate CoA ligase, glycine C-acetyltransferase.
  
 
 0.761
KRT62499.1
Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.736
KRT62312.1
Putative oxidoreductase.
  
 
 0.724
KRT63535.1
Glutamate synthase, glutamate synthase (ferredoxin).
     
 0.703
KRT63570.1
Hypothetical protein.
    
  0.698
KRT63572.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
    
  0.668
KRT61487.1
Pyruvate:ferredoxin oxidoreductase-like protein 2-oxoacid:ferredoxin oxidoreductase subunit alpha, 2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.668
KRT63529.1
Acetylornithine transaminase, 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
0.663
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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