STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT60444.1NAD-dependent epimerase/dehydratase. (303 aa)    
Predicted Functional Partners:
gmd
GDP-mannose 4,6-dehydratase, GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
  
 
0.942
KRT63279.1
Putative nucleotidyl transferase.
 
 
 0.720
KRT64478.1
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.718
KRT62607.1
Hypothetical protein.
  
 0.684
KRT60360.1
NADH-ubiquinone oxidoreductase, NADH dehydrogenase, NADH dehydrogenase.
  
 0.684
KRT63983.1
Uncharacterized protein.
  
 
 0.655
KRT64131.1
Hypothetical protein.
  
 
 0.645
KRT64470.1
Teichoic-acid-transporting AtPase, lipopolysaccharide transport system ATP-binding protein.
 
  
 0.584
KRT64487.1
Nucleotide sugar dehydrogenase, UDPglucose 6-dehydrogenase.
 
 
 0.559
KRT64249.1
L-alanine:N-amidino-3-keto-scyllo-inosamine aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.548
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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