STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT60354.1ABC efflux pump, inner membrane subunit. (432 aa)    
Predicted Functional Partners:
KRT60329.1
ABC transporter-like protein.
 0.997
KRT64585.1
Glutamate transport ATP-binding protein.
 
   
  0.937
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
      0.900
KRT63666.1
ABC transporter-like protein, NitT/TauT family transport system ATP-binding protein.
 
      0.900
KRT62653.1
Spermidine/putrescine ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 
    0.899
opuAA5
Glycine betaine transport ATP-binding protein OpuAA.
 
      0.898
ugpC
Sugar ABC transporter ATP binding protein, putative glycerol 3-phosphate transport protein, ugpC-like protein; Belongs to the ABC transporter superfamily.
 
      0.897
ssuB
ABC transporter ATP-binding protein.
 
      0.895
potA-5
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
    0.894
KRT63156.1
Multidrug ABC transporter ATPase, antibiotic transport system ATP-binding protein.
 
      0.891
Your Current Organism:
Chloroflexi bacterium CSP14
NCBI taxonomy Id: 1640513
Other names: C. bacterium CSP1-4, Chloroflexi bacterium CSP1-4
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