STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT71295.1Metallo-beta-lactamase superfamily. (814 aa)    
Predicted Functional Partners:
KRT68085.1
Putative phosphoribosyltransferase.
 
  
 0.898
KRT69035.1
DprA, DNA processing protein DprA.
 
  
 0.882
KRT70287.1
Type 4 prepilin-like protein leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.807
KRT70463.1
Multi-sensor hybrid histidine kinase.
  
  
 0.691
KRT70429.1
Tfp pilus biogenesis protein PilC, type IV pilus assembly protein PilC.
   
  
 0.684
pilC
Type 4 fimbrial assembly protein pilC.
   
  
 0.684
KRT69622.1
Type II secretion system protein, type IV pilus assembly protein PilC.
   
  
 0.684
KRT68938.1
Type II secretion system F domain-containing protein, MSHA biogenesis protein MshG.
   
  
 0.684
KRT69686.1
Polymerase III, delta subunit protein.
 
   
 0.675
xseA
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.644
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.