STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT70990.1Peptidase M, neutral zinc metallopeptidase, zinc-binding site. (457 aa)    
Predicted Functional Partners:
KRT70436.1
Hypothetical protein.
 
 0.778
KRT71190.1
Adenylate/guanylate cyclase.
 
  
  0.697
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.669
KRT69857.1
TPR-repeat-containing protein.
  
   0.646
KRT69701.1
GAF sensor-containing adenylate/guanylate cyclase.
    
  0.625
KRT69262.1
Hypothetical protein.
 
 
  0.623
KRT69971.1
Hypothetical protein.
 
    0.611
KRT71095.1
Hypothetical protein.
  
   0.593
KRT68247.1
TPR repeat-containing protein.
  
   0.585
KRT68168.1
Response regulator receiver protein.
  
 
 0.571
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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