STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG3-oxoacyl-(Acyl-carrier protein) reductase. (253 aa)    
Predicted Functional Partners:
KRT69224.1
Hypothetical protein.
   
 0.941
lpxC-2
lpxC/fabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 0.772
fabD
Malonyl CoA-acyl carrier protein transacylase, [acyl-carrier-protein] S-malonyltransferase.
 0.771
KRT68658.1
GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin).
     
 0.751
KRT70065.1
2-acylglycerophosphoethanolamine acyltransferase, acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase.
  
 0.749
KRT70436.1
Hypothetical protein.
  
 
 0.742
ppiA
Peptidyl-prolyl cis-trans isomerase A, peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.740
KRT71168.1
Hypothetical protein.
       0.734
KRT71167.1
Hypothetical protein.
       0.732
KRT68373.1
Type I phosphodiesterase/nucleotide pyrophosphatase.
   
 
 0.677
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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