STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT70729.1Cytochrome b subunit of formate dehydrogenase-like protein. (477 aa)    
Predicted Functional Partners:
KRT68877.1
Molybdopterin oxidoreductase Fe4S4 region, molybdopterin oxidoreductase, iron-sulfur binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.996
KRT70728.1
Hypothetical protein.
     0.994
KRT70727.1
Hypothetical protein.
 
 
  0.952
KRT70733.1
Plastoquinol--plastocyanin reductase.
 
  
  0.932
KRT70888.1
4Fe-4S ferredoxin.
  
 0.890
KRT70730.1
Hypothetical protein.
  
 
  0.872
KRT70722.1
Molybdopterin oxidoreductase 4Fe-4S ferredoxin.
 
 0.870
petB
Cytochrome bc complex cytochrome b subunit.
 
  
 0.865
KRT70726.1
Hypothetical protein.
  
 
  0.850
KRT70882.1
Formate dehydrogenase subunit beta, formate dehydrogenase, beta subunit.
  
 0.847
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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