STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT70289.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
KRT70290.1
Hypothetical protein.
 
     0.950
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
    
 0.885
dnaK
Chaperone protein dnaK, Heat shock protein 70, Heat shock 70 kDa protein, (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.869
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.819
KRT70291.1
ABC transporter-like protein, ABC-2 type transport system ATP-binding protein.
 
     0.813
KRT70477.1
Glycosyltransferase.
   
  0.762
KRT68111.1
Glycosyl transferase family protein, cellulose synthase (UDP-forming).
   
  0.762
KRT69570.1
Metal dependent phosphohydrolase.
 
 
 0.748
KRT68536.1
Histidine kinase.
   
 0.716
KRT70561.1
Choline dehydrogenase-like protein flavoprotein.
    
  0.711
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.