STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT70294.1Fimbrial protein pilin, type IV pilus assembly protein PilA. (184 aa)    
Predicted Functional Partners:
KRT69763.1
Hypothetical protein.
 
  
 0.775
KRT69758.1
Type IV pilus assembly protein PilM.
 
   
 0.713
pilC
Type 4 fimbrial assembly protein pilC.
 
   
 0.660
KRT70287.1
Type 4 prepilin-like protein leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.655
yggR
Transporter.
 
   
 0.645
KRT69756.1
Hypothetical protein.
 
   
 0.635
gspG
General secretion pathway protein G.
 
    
0.576
KRT69986.1
Hypothetical protein.
 
  
 0.551
KRT70292.1
General secretion pathway protein G.
 
  
 
0.547
KRT68326.1
Hypothetical protein.
 
  
 0.540
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.