STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT70406.1NUDIX hydrolase. (192 aa)    
Predicted Functional Partners:
KRT68925.1
Ribonucleoside-diphosphate reductase, ribonucleoside-diphosphate reductase alpha chain; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
    
  0.689
KRT70688.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase.
    
  0.683
KRT69569.1
Pyruvate kinase, pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.667
cinA
Competence-damage inducible protein; Belongs to the CinA family.
    
  0.665
KRT69667.1
Homocysteine S-methyltransferase, 5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.660
KRT70407.1
Haloacid dehalogenase.
  
    0.645
KRT69701.1
GAF sensor-containing adenylate/guanylate cyclase.
     
 0.633
KRT68107.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
 
  
  0.623
KRT70150.1
Hypothetical protein.
    
  0.599
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
  
 
 0.592
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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