STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT69620.1Hypothetical protein. (303 aa)    
Predicted Functional Partners:
KRT69757.1
Fimbrial assembly family protein, type IV pilus assembly protein PilN.
  
 0.973
KRT69618.1
Putative type IV pilus assembly protein PilO, type IV pilus assembly protein PilO.
  
 
 0.865
KRT69621.1
Type IV pilus biogenesis protein PilB, type IV pilus assembly protein PilB.
   
 
 0.852
KRT69622.1
Type II secretion system protein, type IV pilus assembly protein PilC.
   
 
 0.844
KRT69619.1
Fimbrial assembly family protein, type IV pilus assembly protein PilN.
       0.773
KRT69754.1
Type IV pilus secretin PilQ, type IV pilus assembly protein PilQ.
  
 
 0.763
KRT69755.1
Hypothetical protein.
  
 
 0.722
pulQ
Type II secretion system secretin lipoprotein PulQ, general secretion pathway protein D; Belongs to the bacterial secretin family.
  
  
 0.568
KRT69617.1
Hypothetical protein.
       0.445
KRT69615.1
Type II secretory pathway, pseudopilin PulG, general secretion pathway protein G.
  
    0.440
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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