Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRT68658.1 | KRT69389.1 | XU15_C0018G0035 | XU15_C0011G0071 | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | Ssb, single-stranded DNA-binding protein, single-strand DNA-binding protein. | 0.410 |
| KRT68658.1 | KRT70688.1 | XU15_C0018G0035 | XU15_C0003G0062 | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | 0.843 |
| KRT68658.1 | KRT70979.1 | XU15_C0018G0035 | XU15_C0002G0133 | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | Hypothetical protein. | 0.410 |
| KRT68658.1 | korA | XU15_C0018G0035 | XU15_C0018G0024 | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.810 |
| KRT68658.1 | recA | XU15_C0018G0035 | XU15_C0009G0033 | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.444 |
| KRT68658.1 | topA | XU15_C0018G0035 | XU15_C0014G0073 | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | Topoisomerase I protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA [...] | 0.975 |
| KRT68906.1 | KRT70688.1 | XU15_C0015G0036 | XU15_C0003G0062 | Octaheme cytochrome c. | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | 0.437 |
| KRT68906.1 | topA | XU15_C0015G0036 | XU15_C0014G0073 | Octaheme cytochrome c. | Topoisomerase I protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA [...] | 0.961 |
| KRT69389.1 | KRT68658.1 | XU15_C0011G0071 | XU15_C0018G0035 | Ssb, single-stranded DNA-binding protein, single-strand DNA-binding protein. | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | 0.410 |
| KRT69389.1 | topA | XU15_C0011G0071 | XU15_C0014G0073 | Ssb, single-stranded DNA-binding protein, single-strand DNA-binding protein. | Topoisomerase I protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA [...] | 0.980 |
| KRT70688.1 | KRT68658.1 | XU15_C0003G0062 | XU15_C0018G0035 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | 0.843 |
| KRT70688.1 | KRT68906.1 | XU15_C0003G0062 | XU15_C0015G0036 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | Octaheme cytochrome c. | 0.437 |
| KRT70688.1 | korA | XU15_C0003G0062 | XU15_C0018G0024 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
| KRT70688.1 | leuS | XU15_C0003G0062 | XU15_C0009G0044 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | Leucine tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.928 |
| KRT70688.1 | recA | XU15_C0003G0062 | XU15_C0009G0033 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.468 |
| KRT70688.1 | topA | XU15_C0003G0062 | XU15_C0014G0073 | Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein, putative pyruvate-flavodoxin oxidoreductase. | Topoisomerase I protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA [...] | 0.999 |
| KRT70979.1 | KRT68658.1 | XU15_C0002G0133 | XU15_C0018G0035 | Hypothetical protein. | GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin). | 0.410 |
| KRT70979.1 | recA | XU15_C0002G0133 | XU15_C0009G0033 | Hypothetical protein. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.437 |
| KRT70979.1 | rpoA | XU15_C0002G0133 | XU15_C0002G0192 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.416 |
| KRT70979.1 | topA | XU15_C0002G0133 | XU15_C0014G0073 | Hypothetical protein. | Topoisomerase I protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA [...] | 0.980 |
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