STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT68844.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
KRT68843.1
Hypothetical protein.
       0.773
KRT68842.1
Hypothetical protein.
       0.648
KRT68841.1
Hypothetical protein.
       0.619
dapB
Dihydrodipicolinate reductase (DHPR); Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
   
 
  0.601
KRT71212.1
Hypothetical protein.
   
 
  0.556
KRT68629.1
Plastoquinol--plastocyanin reductase.
  
  
  0.549
KRT68839.1
Hypothetical protein.
 
     0.505
KRT68845.1
Hypothetical protein.
       0.434
KRT70470.1
Type 11 methyltransferase.
  
    0.427
KRT69236.1
O-methyltransferase family protein.
  
    0.427
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.