STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT68645.1Peroxiredoxin (PRX) family, AhpE-like protein subfamily. (154 aa)    
Predicted Functional Partners:
KRT68643.1
Methionine synthase, 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase.
    
  0.679
KRT68644.1
Methylcobalamin:homocysteine methyltransferase.
    
  0.679
KRT69667.1
Homocysteine S-methyltransferase, 5-methyltetrahydrofolate--homocysteine methyltransferase.
    
  0.651
cbbT
Transketolase (TK); Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 
  
  0.638
trpC
Indole-3-glycerol-phosphate synthase (IGPS); Belongs to the TrpC family.
  
 
  0.605
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
    
  0.576
thrB
Homoserine kinase, HSK, HK; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
  
  0.545
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
 
  0.545
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
       0.533
KRT68646.1
Thiamine pyrophosphate domain-containing TPP-binding protein, 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
       0.500
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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