STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT68264.1Dioxygenase, ferredoxin subunit. (131 aa)    
Predicted Functional Partners:
narZ
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.796
KRT68658.1
GltB, glutamate synthase domain-containing 2, glutamate synthase (ferredoxin).
   
 
 0.796
ddhB
Respiratory nitrate reductase beta chain.
   
 
 0.774
nxrB1
Putative nitrate oxidoreductase subunit beta, nitrate reductase 1, beta subunit.
   
 
 0.774
KRT69224.1
Hypothetical protein.
  
 
 0.767
actP
Copper-transporting P-type ATPase.
   
  0.724
KRT68636.1
ATPase P, Cu2+-exporting ATPase.
   
  0.703
KRT68630.1
Hypothetical protein.
   
  0.702
KRT68634.1
YHS domain-containing protein.
   
  0.702
KRT68632.1
YHS domain-containing protein.
    
  0.701
Your Current Organism:
candidate division NC10 bacterium CSP15
NCBI taxonomy Id: 1640516
Other names: c. division NC10 bacterium CSP1-5, candidate division NC10 bacterium CSP1-5
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